Design, synthesis, and structure-affinity relationships of regioisomeric N-benzyl alkyl ether piperazine derivatives as sigma-1 receptor ligands

J Med Chem. 2010 Aug 26;53(16):6228-39. doi: 10.1021/jm100639f.

Abstract

A series of N-(benzofuran-2-ylmethyl)-N'-benzylpiperazines bearing alkyl or fluoroalkyl aryl ethers were synthesized and evaluated at various central nervous system receptors. Examination of in vitro sigma1 {[3H]+-pentazocine} and sigma2 ([3H]DTG) receptor binding profiles of piperazines 11-13 and 25-36 revealed several highly potent and sigma1 selective ligands, notably, N-(benzofuran-2-ylmethyl)-N'-(4'-methoxybenzyl)piperazine (13, Ki=2.7 nM, sigma2/sigma1=38) and N-(benzofuran-2-ylmethyl)-N'-(4'-(2''-fluoroethoxy)benzyl)piperazine (30, Ki=2.6 nM, sigma2/sigma1=187). Structural features for optimal sigma1 receptor affinity and selectivity over the sigma2 receptor were identified. On the basis of its favorable log D value, 13 was selected as a candidate for the development of a sigma1 receptor positron emission tomography radiotracer. [11C]13 showed high uptake in the brain and other sigma receptor-rich organs of a Papio hamadryas baboon. The in vivo evaluation of [11C]13 indicates that this radiotracer is a suitable candidate for imaging the sigma1 receptor in neurodegenerative processes.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Benzofurans / chemical synthesis*
  • Benzofurans / chemistry
  • Benzofurans / pharmacokinetics
  • Binding, Competitive
  • Brain / metabolism
  • Carbon Radioisotopes
  • Ethers / chemical synthesis
  • Ethers / chemistry
  • Ethers / pharmacokinetics
  • In Vitro Techniques
  • Ligands
  • PC12 Cells
  • Papio
  • Piperazines / chemical synthesis*
  • Piperazines / chemistry
  • Piperazines / pharmacokinetics
  • Positron-Emission Tomography
  • Radioligand Assay
  • Radiopharmaceuticals / chemical synthesis*
  • Radiopharmaceuticals / chemistry
  • Radiopharmaceuticals / pharmacokinetics
  • Rats
  • Receptors, sigma / metabolism*
  • Stereoisomerism
  • Structure-Activity Relationship
  • Tissue Distribution

Substances

  • Benzofurans
  • Carbon Radioisotopes
  • Ethers
  • Ligands
  • N-((benzofuran-2-yl)methyl)-N'-(4'-methoxybenzyl)piperazine
  • Piperazines
  • Radiopharmaceuticals
  • Receptors, sigma